Disease: Malignant neoplasm of colon and/or rectum
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs9904341
BIRC5
0.695 0.280 17 78214286 5 prime UTR variant G/A;C;T snv 0.38; 4.8E-06 20
rs9350
EXO1
0.742 0.240 1 241885372 missense variant C/T snv 0.21 0.19 16
rs9282861
SULT1A1
0.658 0.440 16 28606193 missense variant C/T snv 31
rs914956206
VEGFA
0.882 0.080 6 43770762 missense variant G/A;T snv 4
rs909797662
EGFR
0.790 0.120 7 55191837 missense variant G/A snv 8
rs895520
NPAS2
0.689 0.320 2 100961475 intron variant G/A snv 0.35 23
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213
rs876658657
MLH1
0.677 0.280 3 37020356 missense variant A/G snv 4.0E-06 25
rs861539
KLC1 ; XRCC3
0.519 0.680 14 103699416 missense variant G/A snv 0.29 0.30 104
rs854560
PON1
0.513 0.800 7 95316772 missense variant A/C;G;N;T snv 0.29 113
rs7903146
TCF7L2
0.554 0.680 10 112998590 intron variant C/G;T snv 93
rs781172058
CXCR4
0.732 0.320 2 136115340 synonymous variant C/T snv 4.0E-06 16
rs777980327
APC
0.716 0.280 5 112837567 missense variant A/T snv 4.0E-06 7.0E-06 21
rs777919630
CBS
0.623 0.680 21 43062358 missense variant G/A;T snv 8.0E-06; 4.0E-06 40
rs773919809
MGMT
0.763 0.200 10 129766957 missense variant C/T snv 2.0E-05 13
rs770327175
CXCR4
0.851 0.120 2 136115878 missense variant C/A;T snv 8.0E-06 5
rs767741751
MCPH1 ; ANGPT2
0.851 0.120 8 6562846 missense variant C/A snv 4.0E-06 5
rs766914563
LOC112268426 ; CXCR4
0.732 0.320 2 136115082 synonymous variant C/T snv 7.0E-06 16
rs763780
IL17F
0.531 0.720 6 52236941 missense variant T/C snv 6.7E-02 6.6E-02 87
rs762551
CYP1A2
0.701 0.400 15 74749576 intron variant C/A snv 0.67 23
rs759412116
ERCC2
0.581 0.640 19 45352210 missense variant C/G;T snv 4.0E-06; 6.0E-05 55
rs758272654
GNAS
0.611 0.680 20 58909201 synonymous variant T/C snv 4.0E-06 7.0E-06 50
rs7581886
NPAS2
0.708 0.320 2 100964784 intron variant C/T snv 0.92 18
rs756045117
MLH1
0.925 0.080 3 37012090 missense variant C/G;T snv 1.6E-05 3
rs755100942
ARL11
0.724 0.320 13 49630894 stop gained G/A snv 4.2E-06 17